Machette (currently unavailable in 1.0 as well as 1.1)
Slash
Leaf Blade
Psycho Cut
Fly
VIP Pass (allows free usage of pika taxi, can be gotten by multiple usages of the pika taxi each time you travel the fare is 500 pokedollars (Fly HM is given by Bug Catcher in house on route 8)
Strength
Dolly (currently unavailable in 1.0 as well as 1.1)
Slam
Headbutt
Bulldoze
Psychic
Steamroller
Whirlwind
Rock Throw
Ominous Wind
Rock Smash
Pickaxe (currently unavailable in 1.0 as well as 1.1)
All Fighting-type moves.
Rock Climb
Hiking Boots
Surf
Instant Lapras acquired after first Gym
Waterfall
Jetpack (currently unavailable in 1.0 as well as 1.1)
Flash
Flashlight (found in Helios Sewers)
Dive
Scuba Gear (given by gym leader Anastasia after Audrey is seen riding on lugia creating storms)
Tesseract
Mew Ability (After you complete the Dragon Ruins event)